Center for Computational and Integrative Biology

Recent Publications

Lembong J, Yakoby N, and Shvartsman SY. 2009. Pattern formation by dynamically interacting network motifs. Proceedings of the National Academy of Sciences. 106(9):3213-8. Abstract.

Sayers CW, Coleman J and Shain DH. 2009. Cell dynamics during cocoon secretion in the aquatic leech Theromyzon tessulatum. Tissue & Cell 41:35-42. Abstract.

Saidel WM, Mandau M, Haynes PT. 2008. Spatial distribution of a fusiform cell in the optic tectum of Pantodon buchholzi, the African butterfly fish (Teleostei, Osteoglossomorpha). Brain Research, 1243: 636-9. Abstract.

Yakoby N , Lembong J, Schüpbach T, and Shvartsman SY. 2008. Drosophila eggshell is patterned by sequential action of feedforward and feedback loops. 2008. Development. 135:343-351. Abstract.

Nix-Stohr S, Moshe R, and Dighton J. 2008. Effects of propagule density and survival strategies on establishment and growth: further invetsigations in the phylloplane fungal model system. Microbial Ecology. 55:38-44. Abstract.

Yakoby N , Bristow CA, Gong D, Schafer X, Lembong J, Zartman JJ, Halfon M, Schupbach T, and Shvartsman SY. 2008. A combinatorial code for pattern formation in Drosophila oogenesis. Developmental Cell. 15:725-737. Abstract.

Hong D. 2007. Analysis of noise-induced phase synchronization in nervous systems: from algorithmic perspective. Information Processing Letters105 35-39. Abstract available online.

Hong D, Saidel W, Man, S, Martin J. 2007. Extracellular Noise-Induced Stochastic Synchronization in Heterogeneous Quorum Sensing Network. Journal of Theoretical Biology 245: 726-736. Abstract.

Hong D, Martin J, Saidel W. 2006. The Mechanism for Stochastic Resonance Enhancement of Mammalian Auditory Information Processing. Theoretical Biology and Medical Modelling 3: 39. Article.

Mason T, McIlroy PM, Shain D. 2007. Structural Model of an Antistasin/Notch-like Fusion Protein from the Cocoon Wall of the Aquatic Leech, Theromyzon tessulatum. Journal of Molecular Modeling 12: 829-834. Abstract.

Butler RN, Gavin HA, Moloney EM, Patick McArdle P, Cunningham D, Burke LA. 2006. Spirally twisted imidazolium iminyl ylide structures from 1,2-rearrangements in reactions of imidazolium dicyanomethanide 1,3-dipoles with maleic anhydride: new perspectives on the Boekelheide-Fedoruk ring expansions. Tetrahedron Letters 47: 6107-6111. Article.

Gagliardi LJ. 2006. Electrostatic considerations in nuclear envelope breakdown and reassembly. Journal of Electrostatics 64: 843-849. Abstract.